Gene Transfer in Bacteria

Bacteria divide by binary fission which is a form of asexual reproduction (does not involve sex).

1) Transformation - uptake of pure DNA, NO cell to cell contact

2) Transduction - transfer of DNA by viruses, NO cell to cell contact

3) Conjugation - DNA transferred from donor to recipient cell via conjugation bridge

 

Transformation

Historical: Oswald Avery in 1944 proved that DNA ALONE is the genetic information

Principle of transformation

How do we get the DNA in? Make the cells competent (able to take up DNA) by:

a) chemical treatment - usually cold shock plus Ca2+ (E. coli)

b) electroporator - high voltage shock (yeast)

 

What happens to the DNA?

a) restriction - DNA is regarded as "foreign" and is degraded by restriction enzymes

b) recombination

 

Recombination

-incoming DNA must match host DNA

-incoming genes replace original recipient genes

a) if incoming DNA is linear it must recombine to survive

b) if incoming DNA is:

I) circular

II) has its own origin of replication

then it can survive without recombination

 

Plasmid

-circular molecule of DNA

-can replicate itself

a) found naturally in many bacteria

b) widely used in genetic engineering

 

Transduction

BACTERIOPHAGE infects donor cell and destroys it.

-most virus particles carry virus DNA

-1 in 10,000 carry bacterial DNA by mistake

Generalized Transduction by P1

- P1 attacks E. coli

- P1 carries 90 kilobases of DNA (80-90 genes)

- Any particular gene will be carried AT RANDOM by 1 in 500,000 viruses

- Get 1,000,000,000 bacteria per ml so transduction happens quite often

Specialized Transduction

- a few genes are chosen preferentially (e.g. lambda bacteriophage)

 

Conjugation

Donor = F+

Recipient = F-

The cell-to-cell contact of the donor and the recipient form the sex pilus

DNA moves through conjugation bridge from donor to recipient

F = Fertility

Donor ability is due to F-plasmid

F-plasmid

oriV - origin for vegetative replication

tra - transfer genes

oriT - origin of transfer

rep - replication genes

 

oriV

- replication is bi-directional (like bacterial chromosome)

- replicates in synchrony with bacterial chromosome

 

oriT

- rolling circle replication

- single strand enters recipient which will synthesize the complementary strand

 

Chromosomal Transfer by F-plasmid

- genes on F-plasmid (tra genes) specify formation of sex pilus and conjugation bridge

- usually only F-plasmid is transferred

- sometimes chromosomal genes are moved

 

Insertion Sequence "IS"

- integration (crossing over) of plasmid can occur at matching "IS" sequences

 

E.coli chromosome has:

7 copies of IS 1

13 copies of IS 2

6 copies of IS 3

F plasmid has:

0 copies of IS 1

2 copies of IS 2

1 copy of IS 3

 

Hfr - strain ("high frequency")

- F-plasmid is integrated into the chromosome so transfers bacterial genes

- usually only front half of F-plasmid enters recipient and only part of chromosome is transferred

 

R-plasmids ("resistance")

- carries antibiotic resistance genes

- most R-plasmids cannot transfer the chromosome

 

Host Range

F-plasmid and related R-plasmids can inhabit enteric bacteria:

E. coli

Salmonella

Shigella

Yersinia

 

P-plasmids can inhabit most gram-negative bacteria, originally P for Pseudomonas, later P for promiscuous

 

Incompatibility

- Two related plasmids cannot inhabit the same bacterium (rep genes)

- Two unrelated plasmids OK (fig 8.17)

 

ColE plasmid

small multicopy plasmids

- not transferable

- may be mob+ (mobilization)


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Last updated: 11-Mar-99 / laa